SOLiD™ Accuracy Enhancement Tool
Description
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The SOLiD™ Accuracy Enhancer Tool (SAET) uses raw data generated by SOLiD™ Analyzer to correct miscalls within reads prior to mapping or contig assembly.
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Use of SAET, on various datasets of whole or sub-genomes of < 200 Mbp in size and of varying complexities, readlengths, and sequence coverages, has demonstrated improvements in mapping, SNP calling, and de novo assembly results.
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For denovo applications, the tool reduces miscall rate substantially.
Licensing
Support
- This tool is being released as "unsupported software" by Applied Bioysystems
Documentation
- Documentation can be found here.
Software Download
- The Software zip file can be found here.
Sample Download
- Sample Dataset can be downloaded here.
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| Description |
The SOLiD™ Accuracy Enhancer Tool
(SAET) uses raw data generated by
SOLiD™ Analyzer to correct miscalls
within reads prior to mapping or contig
assembly.
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| Developer Info |
SOLiD™ System Developer
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| Trove Categorization |
- Development Status: 4 - Beta
- Intended Audience: Developers,
End Users/Desktop
- License: Applied Biosystems EULA: SOLiD Accuracy Enhancement Tool
- Operating System: Linux 64 Bit
- Programming Language: C++
- Spoken Language: Not Applicable
- Topic: Bio-Informatics
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